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<?php
/**
 * Class used internally by Text_Diff to actually compute the diffs.
 *
 * This class is implemented using native PHP code.
 *
 * The algorithm used here is mostly lifted from the perl module
 * Algorithm::Diff (version 1.06) by Ned Konz, which is available at:
 * http://www.perl.com/CPAN/authors/id/N/NE/NEDKONZ/Algorithm-Diff-1.06.zip
 *
 * More ideas are taken from: http://www.ics.uci.edu/~eppstein/161/960229.html
 *
 * Some ideas (and a bit of code) are taken from analyze.c, of GNU
 * diffutils-2.7, which can be found at:
 * ftp://gnudist.gnu.org/pub/gnu/diffutils/diffutils-2.7.tar.gz
 *
 * Some ideas (subdivision by NCHUNKS > 2, and some optimizations) are from
 * Geoffrey T. Dairiki <dairiki@dairiki.org>. The original PHP version of this
 * code was written by him, and is used/adapted with his permission.
 *
 * Copyright 2004-2010 The Horde Project (http://www.horde.org/)
 *
 * See the enclosed file COPYING for license information (LGPL). If you did
 * not receive this file, see http://opensource.org/licenses/lgpl-license.php.
 *
 * @author  Geoffrey T. Dairiki <dairiki@dairiki.org>
 * @package Text_Diff
 */
class Text_Diff_Engine_native {

    function
diff($from_lines, $to_lines)
    {
       
array_walk($from_lines, array('Text_Diff', 'trimNewlines'));
       
array_walk($to_lines, array('Text_Diff', 'trimNewlines'));

       
$n_from = count($from_lines);
       
$n_to = count($to_lines);

       
$this->xchanged = $this->ychanged = array();
       
$this->xv = $this->yv = array();
       
$this->xind = $this->yind = array();
        unset(
$this->seq);
        unset(
$this->in_seq);
        unset(
$this->lcs);

       
// Skip leading common lines.
       
for ($skip = 0; $skip < $n_from && $skip < $n_to; $skip++) {
            if (
$from_lines[$skip] !== $to_lines[$skip]) {
                break;
            }
           
$this->xchanged[$skip] = $this->ychanged[$skip] = false;
        }

       
// Skip trailing common lines.
       
$xi = $n_from; $yi = $n_to;
        for (
$endskip = 0; --$xi > $skip && --$yi > $skip; $endskip++) {
            if (
$from_lines[$xi] !== $to_lines[$yi]) {
                break;
            }
           
$this->xchanged[$xi] = $this->ychanged[$yi] = false;
        }

       
// Ignore lines which do not exist in both files.
       
for ($xi = $skip; $xi < $n_from - $endskip; $xi++) {
           
$xhash[$from_lines[$xi]] = 1;
        }
        for (
$yi = $skip; $yi < $n_to - $endskip; $yi++) {
           
$line = $to_lines[$yi];
            if ((
$this->ychanged[$yi] = empty($xhash[$line]))) {
                continue;
            }
           
$yhash[$line] = 1;
           
$this->yv[] = $line;
           
$this->yind[] = $yi;
        }
        for (
$xi = $skip; $xi < $n_from - $endskip; $xi++) {
           
$line = $from_lines[$xi];
            if ((
$this->xchanged[$xi] = empty($yhash[$line]))) {
                continue;
            }
           
$this->xv[] = $line;
           
$this->xind[] = $xi;
        }

       
// Find the LCS.
       
$this->_compareseq(0, count($this->xv), 0, count($this->yv));

       
// Merge edits when possible.
       
$this->_shiftBoundaries($from_lines, $this->xchanged, $this->ychanged);
       
$this->_shiftBoundaries($to_lines, $this->ychanged, $this->xchanged);

       
// Compute the edit operations.
       
$edits = array();
       
$xi = $yi = 0;
        while (
$xi < $n_from || $yi < $n_to) {
           
assert($yi < $n_to || $this->xchanged[$xi]);
           
assert($xi < $n_from || $this->ychanged[$yi]);

           
// Skip matching "snake".
           
$copy = array();
            while (
$xi < $n_from && $yi < $n_to
                   
&& !$this->xchanged[$xi] && !$this->ychanged[$yi]) {
               
$copy[] = $from_lines[$xi++];
                ++
$yi;
            }
            if (
$copy) {
               
$edits[] = new Text_Diff_Op_copy($copy);
            }

           
// Find deletes & adds.
           
$delete = array();
            while (
$xi < $n_from && $this->xchanged[$xi]) {
               
$delete[] = $from_lines[$xi++];
            }

           
$add = array();
            while (
$yi < $n_to && $this->ychanged[$yi]) {
               
$add[] = $to_lines[$yi++];
            }

            if (
$delete && $add) {
               
$edits[] = new Text_Diff_Op_change($delete, $add);
            } elseif (
$delete) {
               
$edits[] = new Text_Diff_Op_delete($delete);
            } elseif (
$add) {
               
$edits[] = new Text_Diff_Op_add($add);
            }
        }

        return
$edits;
    }

   
/**
     * Divides the Largest Common Subsequence (LCS) of the sequences (XOFF,
     * XLIM) and (YOFF, YLIM) into NCHUNKS approximately equally sized
     * segments.
     *
     * Returns (LCS, PTS).  LCS is the length of the LCS. PTS is an array of
     * NCHUNKS+1 (X, Y) indexes giving the diving points between sub
     * sequences.  The first sub-sequence is contained in (X0, X1), (Y0, Y1),
     * the second in (X1, X2), (Y1, Y2) and so on.  Note that (X0, Y0) ==
     * (XOFF, YOFF) and (X[NCHUNKS], Y[NCHUNKS]) == (XLIM, YLIM).
     *
     * This function assumes that the first lines of the specified portions of
     * the two files do not match, and likewise that the last lines do not
     * match.  The caller must trim matching lines from the beginning and end
     * of the portions it is going to specify.
     */
   
function _diag ($xoff, $xlim, $yoff, $ylim, $nchunks)
    {
       
$flip = false;

        if (
$xlim - $xoff > $ylim - $yoff) {
           
/* Things seems faster (I'm not sure I understand why) when the
             * shortest sequence is in X. */
           
$flip = true;
            list (
$xoff, $xlim, $yoff, $ylim)
                = array(
$yoff, $ylim, $xoff, $xlim);
        }

        if (
$flip) {
            for (
$i = $ylim - 1; $i >= $yoff; $i--) {
               
$ymatches[$this->xv[$i]][] = $i;
            }
        } else {
            for (
$i = $ylim - 1; $i >= $yoff; $i--) {
               
$ymatches[$this->yv[$i]][] = $i;
            }
        }

       
$this->lcs = 0;
       
$this->seq[0]= $yoff - 1;
       
$this->in_seq = array();
       
$ymids[0] = array();

       
$numer = $xlim - $xoff + $nchunks - 1;
       
$x = $xoff;
        for (
$chunk = 0; $chunk < $nchunks; $chunk++) {
            if (
$chunk > 0) {
                for (
$i = 0; $i <= $this->lcs; $i++) {
                   
$ymids[$i][$chunk - 1] = $this->seq[$i];
                }
            }

           
$x1 = $xoff + (int)(($numer + ($xlim - $xoff) * $chunk) / $nchunks);
            for (;
$x < $x1; $x++) {
               
$line = $flip ? $this->yv[$x] : $this->xv[$x];
                if (empty(
$ymatches[$line])) {
                    continue;
                }
               
$matches = $ymatches[$line];
               
reset($matches);
                while (
$y = current($matches)) {
                    if (empty(
$this->in_seq[$y])) {
                       
$k = $this->_lcsPos($y);
                       
assert($k > 0);
                       
$ymids[$k] = $ymids[$k - 1];
                        break;
                    }
                   
next($matches);
                }
                while (
$y = current($matches)) {
                    if (
$y > $this->seq[$k - 1]) {
                       
assert($y <= $this->seq[$k]);
                       
/* Optimization: this is a common case: next match is
                         * just replacing previous match. */
                       
$this->in_seq[$this->seq[$k]] = false;
                       
$this->seq[$k] = $y;
                       
$this->in_seq[$y] = 1;
                    } elseif (empty(
$this->in_seq[$y])) {
                       
$k = $this->_lcsPos($y);
                       
assert($k > 0);
                       
$ymids[$k] = $ymids[$k - 1];
                    }
                   
next($matches);
                }
            }
        }

       
$seps[] = $flip ? array($yoff, $xoff) : array($xoff, $yoff);
       
$ymid = $ymids[$this->lcs];
        for (
$n = 0; $n < $nchunks - 1; $n++) {
           
$x1 = $xoff + (int)(($numer + ($xlim - $xoff) * $n) / $nchunks);
           
$y1 = $ymid[$n] + 1;
           
$seps[] = $flip ? array($y1, $x1) : array($x1, $y1);
        }
       
$seps[] = $flip ? array($ylim, $xlim) : array($xlim, $ylim);

        return array(
$this->lcs, $seps);
    }

    function
_lcsPos($ypos)
    {
       
$end = $this->lcs;
        if (
$end == 0 || $ypos > $this->seq[$end]) {
           
$this->seq[++$this->lcs] = $ypos;
           
$this->in_seq[$ypos] = 1;
            return
$this->lcs;
        }

       
$beg = 1;
        while (
$beg < $end) {
           
$mid = (int)(($beg + $end) / 2);
            if (
$ypos > $this->seq[$mid]) {
               
$beg = $mid + 1;
            } else {
               
$end = $mid;
            }
        }

       
assert($ypos != $this->seq[$end]);

       
$this->in_seq[$this->seq[$end]] = false;
       
$this->seq[$end] = $ypos;
       
$this->in_seq[$ypos] = 1;
        return
$end;
    }

   
/**
     * Finds LCS of two sequences.
     *
     * The results are recorded in the vectors $this->{x,y}changed[], by
     * storing a 1 in the element for each line that is an insertion or
     * deletion (ie. is not in the LCS).
     *
     * The subsequence of file 0 is (XOFF, XLIM) and likewise for file 1.
     *
     * Note that XLIM, YLIM are exclusive bounds.  All line numbers are
     * origin-0 and discarded lines are not counted.
     */
   
function _compareseq ($xoff, $xlim, $yoff, $ylim)
    {
       
/* Slide down the bottom initial diagonal. */
       
while ($xoff < $xlim && $yoff < $ylim
               
&& $this->xv[$xoff] == $this->yv[$yoff]) {
            ++
$xoff;
            ++
$yoff;
        }

       
/* Slide up the top initial diagonal. */
       
while ($xlim > $xoff && $ylim > $yoff
               
&& $this->xv[$xlim - 1] == $this->yv[$ylim - 1]) {
            --
$xlim;
            --
$ylim;
        }

        if (
$xoff == $xlim || $yoff == $ylim) {
           
$lcs = 0;
        } else {
           
/* This is ad hoc but seems to work well.  $nchunks =
             * sqrt(min($xlim - $xoff, $ylim - $yoff) / 2.5); $nchunks =
             * max(2,min(8,(int)$nchunks)); */
           
$nchunks = min(7, $xlim - $xoff, $ylim - $yoff) + 1;
            list(
$lcs, $seps)
                =
$this->_diag($xoff, $xlim, $yoff, $ylim, $nchunks);
        }

        if (
$lcs == 0) {
           
/* X and Y sequences have no common subsequence: mark all
             * changed. */
           
while ($yoff < $ylim) {
               
$this->ychanged[$this->yind[$yoff++]] = 1;
            }
            while (
$xoff < $xlim) {
               
$this->xchanged[$this->xind[$xoff++]] = 1;
            }
        } else {
           
/* Use the partitions to split this problem into subproblems. */
           
reset($seps);
           
$pt1 = $seps[0];
            while (
$pt2 = next($seps)) {
               
$this->_compareseq ($pt1[0], $pt2[0], $pt1[1], $pt2[1]);
               
$pt1 = $pt2;
            }
        }
    }

   
/**
     * Adjusts inserts/deletes of identical lines to join changes as much as
     * possible.
     *
     * We do something when a run of changed lines include a line at one end
     * and has an excluded, identical line at the other.  We are free to
     * choose which identical line is included.  `compareseq' usually chooses
     * the one at the beginning, but usually it is cleaner to consider the
     * following identical line to be the "change".
     *
     * This is extracted verbatim from analyze.c (GNU diffutils-2.7).
     */
   
function _shiftBoundaries($lines, &$changed, $other_changed)
    {
       
$i = 0;
       
$j = 0;

       
assert(count($lines) == count($changed));
       
$len = count($lines);
       
$other_len = count($other_changed);

        while (
1) {
           
/* Scan forward to find the beginning of another run of
             * changes. Also keep track of the corresponding point in the
             * other file.
             *
             * Throughout this code, $i and $j are adjusted together so that
             * the first $i elements of $changed and the first $j elements of
             * $other_changed both contain the same number of zeros (unchanged
             * lines).
             *
             * Furthermore, $j is always kept so that $j == $other_len or
             * $other_changed[$j] == false. */
           
while ($j < $other_len && $other_changed[$j]) {
               
$j++;
            }

            while (
$i < $len && ! $changed[$i]) {
               
assert($j < $other_len && ! $other_changed[$j]);
               
$i++; $j++;
                while (
$j < $other_len && $other_changed[$j]) {
                   
$j++;
                }
            }

            if (
$i == $len) {
                break;
            }

           
$start = $i;

           
/* Find the end of this run of changes. */
           
while (++$i < $len && $changed[$i]) {
                continue;
            }

            do {
               
/* Record the length of this run of changes, so that we can
                 * later determine whether the run has grown. */
               
$runlength = $i - $start;

               
/* Move the changed region back, so long as the previous
                 * unchanged line matches the last changed one.  This merges
                 * with previous changed regions. */
               
while ($start > 0 && $lines[$start - 1] == $lines[$i - 1]) {
                   
$changed[--$start] = 1;
                   
$changed[--$i] = false;
                    while (
$start > 0 && $changed[$start - 1]) {
                       
$start--;
                    }
                   
assert($j > 0);
                    while (
$other_changed[--$j]) {
                        continue;
                    }
                   
assert($j >= 0 && !$other_changed[$j]);
                }

               
/* Set CORRESPONDING to the end of the changed run, at the
                 * last point where it corresponds to a changed run in the
                 * other file. CORRESPONDING == LEN means no such point has
                 * been found. */
               
$corresponding = $j < $other_len ? $i : $len;

               
/* Move the changed region forward, so long as the first
                 * changed line matches the following unchanged one.  This
                 * merges with following changed regions.  Do this second, so
                 * that if there are no merges, the changed region is moved
                 * forward as far as possible. */
               
while ($i < $len && $lines[$start] == $lines[$i]) {
                   
$changed[$start++] = false;
                   
$changed[$i++] = 1;
                    while (
$i < $len && $changed[$i]) {
                       
$i++;
                    }

                   
assert($j < $other_len && ! $other_changed[$j]);
                   
$j++;
                    if (
$j < $other_len && $other_changed[$j]) {
                       
$corresponding = $i;
                        while (
$j < $other_len && $other_changed[$j]) {
                           
$j++;
                        }
                    }
                }
            } while (
$runlength != $i - $start);

           
/* If possible, move the fully-merged run of changes back to a
             * corresponding run in the other file. */
           
while ($corresponding < $i) {
               
$changed[--$start] = 1;
               
$changed[--$i] = 0;
               
assert($j > 0);
                while (
$other_changed[--$j]) {
                    continue;
                }
               
assert($j >= 0 && !$other_changed[$j]);
            }
        }
    }

}